Consensus                         CCT---RGAYGTGMWMKMWWTYSMTRCMSSWMGYWMYWYVSRYSWNKNRAKMVNMBBBBD   57
SRR29245461.4108425/1             ...---A..C...ATCGAAA.TGA.G.CGCTA.TAATACCGGTGT-G-G.TAACATTCGG   55
SRR29245461.15203625/2 (reversed) --.---G..T...ATAGAAA.TGA.G.AGCAA.TAACACGGGCGT-T-G.TAATATTCGA   53
SRR29245461.18679978/2 (reversed) --------.C...ATCGAAA.TGA.G.CGCTA.TAATACCGGTGT-G-G.TAACATTCGG   50
SRR29245461.16971908/2            ----------...ATCGAAA.TGA.G.CGCTA.TAATACCGGTGT-G-G.TAACATTCGG   48
SRR29245461.16972091/2            ----------...ATCGAAA.TGA.G.CGCTA.TAATACCGGTGT-G-G.TAACATTCGG   48
SRR29245461.13542963/2            ------------.ATCGAAA.TGA.G.CGCTA.TAATACCGGTGT-G-G.TAACATTCGG   46
SRR29245461.13543144/2            ------------.ATCGAAA.TGA.G.CGCTA.TAATACCGGTGT-G-G.TAACATTCGG   46
SRR29245461.14335201/2 (reversed) -------------CACTCTT.CCC.A.ACGAC.CTCTTCCGATCTTG-G.TAACATTCGG   46
SRR29245461.33843948/1 (reversed) --------------TCGAAA.TGA.G.CGCTA.TAATACCGGTGT-G-G.TAACATTCGG   44
SRR29245461.10481394/1            --------------------------.CGCTA.TAATACGGGTGT-G-G.TAACATTCGG   32
SRR29245461.17458930/2 (reversed) --------------------------------------TACACCAGGTA.GACACTCTTT   22
SRR29245461.11609499/1            --------------------------------------------T-G-G.TAACATTCGG   14
SRR29245461.14335201/1            --------------------------------------------T-G-G.TAACATTCGG   14
SRR29245461.27756961/1 (reversed) ----------------------------------------------G-G.TAACATTCGG   13
SRR29245461.23582667/1 (reversed) ---------------------------------------------------CAGACGTGT    9
SRR29245461.4828155/1 (reversed)  ---------------------------------------------------AACATTCGG    9
SRR29245461.13687947/1            ----------------------------------------------------GACGGGGG    8
SRR29245461.19813196/2 (reversed) ---------------------------------------------------------TCT    3
SRR29245461.13710557/1 (reversed) ----------------------------------------------------------CT    2
SRR29245461.19813196/1            ------------------------------------------------------------
SRR29245461.13710557/2            ------------------------------------------------------------
SRR29245461.20895415/2 (reversed) ------------------------------------------------------------
SRR29245461.7037465/2             ------------------------------------------------------------
SRR29245461.23582667/2            ------------------------------------------------------------
SRR29245461.1293495/2 (reversed)  ------------------------------------------------------------
SRR29245461.17458930/1            ------------------------------------------------------------
SRR29245461.23590117/1 (reversed) ------------------------------------------------------------
SRR29245461.23303928/2            ------------------------------------------------------------
SRR29245461.9142730/2             ------------------------------------------------------------
SRR29245461.7037465/1 (reversed)  ------------------------------------------------------------
SRR29245461.5609983/1             ------------------------------------------------------------
SRR29245461.23501708/1 (reversed) ------------------------------------------------------------
SRR29245461.20895415/1            ------------------------------------------------------------
SRR29245461.5048417/1 (reversed)  ------------------------------------------------------------
SRR29245461.23303928/1 (reversed) ------------------------------------------------------------
SRR29245461.10481394/2 (reversed) ------------------------------------------------------------
SRR29245461.18287036/2            ------------------------------------------------------------
SRR29245461.18287036/1 (reversed) ------------------------------------------------------------
SRR29245461.1293495/1             ------------------------------------------------------------

Consensus                         SMHHWHNYNNDBBSWHSVBRWYKHBMYHMYBWHMHWWBHSKWNVYDMWBBBBHDNWNDTH  117
SRR29245461.4108425/1             GAAATAATCGAGCGATCGCAATTTGCCCCCGTCCAATGTCGTAATAAAGTCTATGACA.T  115
SRR29245461.15203625/2 (reversed) GAAATAATCGAGCGATCGCAATTTGCTCCTGTAAAATGCCGTTATAAAGTTTATGTAA.T  113
SRR29245461.18679978/2 (reversed) GAAATTATCGAGCGATCGCAATTTGCCCCCGTCCAATGTCGTTATAAAGTCTATGTCA.C  110
SRR29245461.16971908/2            GAAATTATCGAGCGATCGCAATTTGCCCCCGTCCAATGTCGTTATAAAGTCTATGTCA.C  108
SRR29245461.16972091/2            GAAATTATCGAGCGATCGCAATTTGCCCCCGTCCAATGTCGTTATAAAGTCTATGTCA.C  108
SRR29245461.13542963/2            GAAATTATCGAGCGATCGCAATTTGCCCCCGTCCAATGTCGTTATAAAGTCTATGTCA.C  106
SRR29245461.13543144/2            GAAATTATCGAGCGATCGCAATTTGCCCCCGTCCAATGTCGTTATAAAGTCTATGTCA.C  106
SRR29245461.14335201/2 (reversed) GAAATTATCGAGCGATCGCAATTTGCCCCCGTCCAATGTCGTTATGAAGTCTATGTCA.T  106
SRR29245461.33843948/1 (reversed) GAAATTATCGAGCGATCGCAATTTGCCCCCGTCCAATGTCGTTATAAAGTCTATGTCA.C  104
SRR29245461.10481394/1            GAAATTATCGAGCGATCGCAATTTGCCCCCGTCCAATGTCGTTATAAAGTCTATGTCA.C   92
SRR29245461.17458930/2 (reversed) CCCTACACACGCTCTTCCGATCTTGCCCCCGTCCAATGTCGTTATAAAGTCTATGTCA.C   82
SRR29245461.11609499/1            GAAATTATCGATCGATCGCAATTTGCCCCCGTCCAATGTCTTTATAAAGTCTATGTCA.A   74
SRR29245461.14335201/1            GAAATTATCGAGCGATCGCAATTTGCCCCCGTCCAATGTCGTTATGAAGTCTATGTCA.T   74
SRR29245461.27756961/1 (reversed) GAAATTATCGAGCGATCGCAATTTGCCCCCGTCCAATGTCGTTATAAAGTCTATGTCA.C   73
SRR29245461.23582667/1 (reversed) GCTCTTCCGATCTGATCGCAATTTGCCCCCGTCCAATGTCGTTATAAAGTCTATGTCA.T   69
SRR29245461.4828155/1 (reversed)  GAAATTATCGAGCGATCGCAATTTGCCCCCGTCCAATGTCGTTATAAAGTCTATGTCA.T   69
SRR29245461.13687947/1            CAAATTGCGATCGCTCGATAATTTCCCCCCGTCCAATGTCGTTATAAAGTCTATGTCA.C   68
SRR29245461.19813196/2 (reversed) GAAATTATCGAGCGATCGCAATTTGCCCCCGTCCAATGTCGTTATAAAGTCTATGTCA.C   63
SRR29245461.13710557/1 (reversed) GAAATTATCGAGCGATCGCAATTTGCCCCCGTCCAATGTCGTTATAAAGTCTATGTCA.C   62
SRR29245461.19813196/1            GAAATTATCGAGCGATCGCAATTTGCCCCCGTCCAATGTCGTTATAAAGTCTATGTCA.C   60
SRR29245461.13710557/2            GAAATTATCGAGCGATCGCAATTTGCCCCCGTCCAATGTCGTTATAAAGTCTATGTCA.C   60
SRR29245461.20895415/2 (reversed) --ACACTCTTTCCCTACACGACGCTCTTCCGATCTATGTCGTTATAAAGTCTATGTCA.T   58
SRR29245461.7037465/2             ---ATTATCGAGCGATCGCAATTTGCCCCCGTCCAATGTCGTTATAAAGTCTATGTCA.C   57
SRR29245461.23582667/2            -------------GATCGCAATTTGCCCCCGTCCAATGTCGTTATAAAGTCTATGTCA.T   47
SRR29245461.1293495/2 (reversed)  ----------------------GACACTCTTTCCCTACACGACGCTCTTCCGATCT-A.T   37
SRR29245461.17458930/1            -----------------------TGCCCCCGTCCAATGTCGTTATAAAGTCTATGTCA.C   37
SRR29245461.23590117/1 (reversed) ------------------------GCCCCCGTCCAATGTCGTTATAAAGTCTATGTCA.T   36
SRR29245461.23303928/2            -------------------------ACAATCATAATTTTGTTGCCAATGGGTTATTAG.T   35
SRR29245461.9142730/2             ----------------------------ATCATAATTTTGTTGCCAATGGGTTATTAG.T   32
SRR29245461.7037465/1 (reversed)  ----------------------------CCGTCCAATGTCGTTATAAAGTCTATGTCA.C   32
SRR29245461.5609983/1             -----------------------------CGTCCAATGTCGTTATAAAGTCTATGTCA.T   31
SRR29245461.23501708/1 (reversed) ----------------------------------ATTTTGTTGCCAATGGGTTATTAG.T   26
SRR29245461.20895415/1            -----------------------------------ATGTCGTTATAAAGTCTATGTCA.T   25
SRR29245461.5048417/1 (reversed)  -------------------------------------------GTGCTCTTCCGATCT.T   17
SRR29245461.23303928/1 (reversed) ---------------------------------------------AATGGGTTATTAG.T   15
SRR29245461.10481394/2 (reversed) -----------------------------------------------AGTCTATGTCA.C   13
SRR29245461.18287036/2            -----------------------------------------------------ATTAG.T    7
SRR29245461.18287036/1 (reversed) ---------------------------------------------------------G.T    3
SRR29245461.1293495/1             ---------------------------------------------------------A.T    3

Consensus                         BATRAHTGMMWKANBNKNRRWRSVVNNBHBDDHDVNVVDNNDSKNWNMWCNNNVKAWSWV  177
SRR29245461.4108425/1             G..G.A..CCAG.TCGGAAGAGCACACGTCTGAACT------------------------  175
SRR29245461.15203625/2 (reversed) G..G.A..CCAT.TGTTAAGTACGGCGGCGTTTAATGC----------------------  173
SRR29245461.18679978/2 (reversed) G..G.A..CCTG.CTGGGGATAGCCTTGTTTTCACCGAAAC-------------------  170
SRR29245461.16971908/2            G..G.A..CCTG.CTGGGGATAGCAGATCGGACGAGCGTCGTG-----------------  168
SRR29245461.16972091/2            G..G.A..CCTG.CTGGGGATAGCAGATCGGAAGAGCGTCGTG-----------------  168
SRR29245461.13542963/2            G..G.A..CCAT.TGCTTAGTACGGCGGCCAGATCGGAAGAGCGT---------------  166
SRR29245461.13543144/2            G..G.A..CCAT.TGCTTAGTACGGCGGCCAGATCGGAAGAGCGT---------------  166
SRR29245461.14335201/2 (reversed) G..G.A..CCAT.TGCTCAGTACGGCGGCCTTTAATGCTTTGCTG---------------  166
SRR29245461.33843948/1 (reversed) G..G.A..CCTG.CTGGGGATAGCCTTGTTTTCACCGAAACGGGATT-------------  164
SRR29245461.10481394/1            G..G.A..CCAT.TGCTCAGTACGGCGGCCTTTAATGCTTTGCTGAAAA.TCTGG.AGA-  152
SRR29245461.17458930/2 (reversed) G..G.A..CCAT.TGCTTAGTACGGCGGCCTTTAATGCTTTGCTGAAAA.TCTGG.AGAA  142
SRR29245461.11609499/1            T..G.T..CAAT.TGCTCAGTACAGCGGCCTTTAATGCTTTGCTGAAAA.TCTGT.AGAA  134
SRR29245461.14335201/1            G..G.A..CCAT.TGCTCAGTACGGCGGCCTTTAATGCTTTGCTGAGAT.---GG.AGAG  131
SRR29245461.27756961/1 (reversed) G..G.A..CCAT.TGCTCAGTACGGCGGCCTTTAATGCTTTGCTGAAAA.TCTGG.AGAA  133
SRR29245461.23582667/1 (reversed) G..G.A..CCAT.TGCTCAGTACGGCGGCCTTTAATGCTTTGCTGAAAA.TCTAG.AGAA  129
SRR29245461.4828155/1 (reversed)  G..G.A..CCAT.TGCTCAGTACGGCGGCCTTTAATGCTTTGCTGAAAA.TCTAG.AGAA  129
SRR29245461.13687947/1            G..G.A..ACAT.-GATCGGAAGAGCACACGTCTGAACTCCAGTCACCT.GAAAT.TCTC  127
SRR29245461.19813196/2 (reversed) G..G.A..CCAT.TGCTCAGTACGGCGGCCTTTAATGCTTTGCTGAAAA.TCTGG.AGAA  123
SRR29245461.13710557/1 (reversed) G..G.A..CCAT.TGCTCAGTACGGCGGCCTTTAATGCTTTGCTGAAAA.TCTGG.AGAA  122
SRR29245461.19813196/1            G..G.A..CCAT.TGCTCAGTACGGCGGCCTTTAATGCTTTGCTGAAAA.TCTGG.AGAA  120
SRR29245461.13710557/2            G..G.A..CCAT.TGCTCAGTACGGCGGCCTTTAATGCTTTGCTGAAAA.TCTGG.AGAA  120
SRR29245461.20895415/2 (reversed) G..G.A..CCAT.TGCTCAGTACGGCGGCCTTTAATGCTTTGCTGAAAA.TCTCG.AGAA  118
SRR29245461.7037465/2             G..G.A..CCAT.TGCTCAGTACGGCGGCCTTTAATGCTTTGCTGAAAA.TCTGG.AGAA  117
SRR29245461.23582667/2            G..G.A..CCAT.TGCTCAGTACGGCGGCCTTTAATGCTTTGCTGAAAA.TCTAG.AGAA  107
SRR29245461.1293495/2 (reversed)  G..G.A..CCAT.TGCTCAGTACGGCGGCCTTTAATGCTTTGCTGAAAA.TCTAG.AGAA   97
SRR29245461.17458930/1            G..G.A..CCAT.TGCTTAGTACGGCGGCCTTTAATGCTTTGCTGAAAA.TCTGG.AGAA   97
SRR29245461.23590117/1 (reversed) G..G.A..CCAT.TGCTCAGTACGGCGGCCTTTAATGCTTTGCTGAAAA.TCTAG.AGAA   96
SRR29245461.23303928/2            C..A.C..CCAT.TGCTCAGTACGGCGGCCTTTAATGCGCTGCTGAAAA.TCTGG.AGAA   95
SRR29245461.9142730/2             C..A.C..CCAT.TGCTCAGTACGGCGGCCTTTAATGCTTTGCTGAAAA.TCTGG.AGAA   92
SRR29245461.7037465/1 (reversed)  G..G.A..CCAT.TGCTCAGTACGGCGGCCTTTAATGCTTTGCTGAAAA.TCTGG.AGAA   92
SRR29245461.5609983/1             G..G.A..CCAT.TGCTCAGTACGGCGGCCTTTAATGCTTTGCTGAAAA.TCTAG.AGAA   91
SRR29245461.23501708/1 (reversed) C..A.C..CCAT.TGCTCAGTACGGCGGCCTTTAATGCGCTGCTGAAAA.TCTGG.AGAA   86
SRR29245461.20895415/1            G..G.A..CCAT.TGCTCAGTACGGCGGCCTTTAATGCTTTGCTGAAAA.TCTCG.AGAA   85
SRR29245461.5048417/1 (reversed)  C..A.C..CCAT.TGCTCAGTACGGCGGCCTTTAATGCTTTGCTGAAAA.TCTGG.AGAA   77
SRR29245461.23303928/1 (reversed) C..A.C..CCAT.TGCTCAGTACGGCGGCCTTTAATGCGCTGCTGAAAA.TCTGG.AGAA   75
SRR29245461.10481394/2 (reversed) G..G.A..CCAT.TGCTCAGTACGGCGGCCTTTAATGCTTTGCTGAAAA.TCTGG.AGAA   73
SRR29245461.18287036/2            C..A.C..CCAT.TGCTCAGTACGGCGGCCTTTAATGCGCTGCTGAAAA.TCTGG.AGAA   67
SRR29245461.18287036/1 (reversed) C..A.C..CCAT.TGCTCAGTACGGCGGCCTTTAATGCGCTGCTGAAAA.TCTGG.AGAA   63
SRR29245461.1293495/1             G..G.A..CCAT.TGCTCAGTACGGCGGCCTTTAATGCTTTGCTGAAAA.TCTAG.AGAA   63

Consensus                         SHVHSVBVTVDWBYSVWDKHNVWBMYBKVDRVMVNNBMKYSDMVKMGHRHHHKNMBNWMB  237
SRR29245461.4108425/1             ------------------------------------------------------------  235
SRR29245461.15203625/2 (reversed) ------------------------------------------------------------  233
SRR29245461.18679978/2 (reversed) ------------------------------------------------------------  230
SRR29245461.16971908/2            ------------------------------------------------------------  228
SRR29245461.16972091/2            ------------------------------------------------------------  228
SRR29245461.13542963/2            ------------------------------------------------------------  226
SRR29245461.13543144/2            ------------------------------------------------------------  226
SRR29245461.14335201/2 (reversed) ------------------------------------------------------------  226
SRR29245461.33843948/1 (reversed) ------------------------------------------------------------  224
SRR29245461.10481394/1            ------------------------------------------------------------  212
SRR29245461.17458930/2 (reversed) CCGCCAGA.---------------------------------------------------  202
SRR29245461.11609499/1            CCGCCGGA.AGAGTGAT-------------------------------------------  194
SRR29245461.14335201/1            CACACGTC.GAACTCCAGTC----------------------------------------  191
SRR29245461.27756961/1 (reversed) CCGCCGGA.CGAGTGATT------------------------------------------  193
SRR29245461.23582667/1 (reversed) CCGCCAGA.CGAGTGATTTTCG--------------------------------------  189
SRR29245461.4828155/1 (reversed)  CCGCCAGA.CGAGTGATTTTCG--------------------------------------  189
SRR29245461.13687947/1            GTATGCCG.CTTCTGCTTGAAAAT------------------------------------  187
SRR29245461.19813196/2 (reversed) CCACCGGA.CGAGTGATTTTCGTGCTTG--------------------------------  183
SRR29245461.13710557/1 (reversed) CCGCCGGA.CGAGTGATTTTTGTGCTTGC-------------------------------  182
SRR29245461.19813196/1            CCACCGGA.CGAGTGATTTTCGTGCTTGAGA-----------------------------  180
SRR29245461.13710557/2            CCGCCGGA.CGAGTGATTTTTGTGCTTGCAG-----------------------------  180
SRR29245461.20895415/2 (reversed) CCGCCAGA.CGAGTGATTTTTGTGCTTGCTACC---------------------------  178
SRR29245461.7037465/2             CCGCCGGA.CGAGTGATTTTTGTGCTTGCTACCA--------------------------  177
SRR29245461.23582667/2            CCGCCAGA.CGAGTGATTTTCGAGATCGGAAGAGCGTCGTGTAG----------------  167
SRR29245461.1293495/2 (reversed)  CCGCCAGA.CGAGTGATTTTTGTGCTTGCTACCACCGATCCTCAGC.TGTCTTA------  157
SRR29245461.17458930/1            CCGCCAGA.AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCTC.AAATATC------  157
SRR29245461.23590117/1 (reversed) CCGCCAGA.CGAGTGATTTTTGTGCTTGCTACCACCGATCCTCAGC.TGTCTTAC-----  156
SRR29245461.23303928/2            CCACCGGA.CGAGTGATTTTTGTGCTTGCTACCACCGATCCTCAGC.TGTCTTGCC----  155
SRR29245461.9142730/2             CCGCCGGA.CGAGTGATTTTTGTGCTTGCTACCACGGATCCTCAGC.TGTCTTGCCTAC-  152
SRR29245461.7037465/1 (reversed)  CCGCCGGA.CGAGTGATTTTTGTGCTTGCTACCACCGATCCTCAGC.TGTCTTGCCTAC-  152
SRR29245461.5609983/1             CCGCCAGA.CGAGTGATTTTTGTGCTTGCTACCACCGATCCTCAGC.TGTCTTACCCACT  151
SRR29245461.23501708/1 (reversed) CCGCCGGA.CGAGTGATTTTTGTGCTTGCTACCACCGATCCTCAGC.TGTCTTGCCTACC  146
SRR29245461.20895415/1            CCGCCAGA.CGAGTGATTTTTGTGCTTGCTACCA--GATCGGAAGA.CACACGTCTGAAC  143
SRR29245461.5048417/1 (reversed)  CCGCCGGA.CGAGTGATTTTTGTGCTTGCTACCACGGATCCTCAGC.TGTCTTGCCTACC  137
SRR29245461.23303928/1 (reversed) CCACCGGA.CGAGTGATTTTTGTGCTTGCTACCACCGATCCTCAGC.TGTCTTGCCTACC  135
SRR29245461.10481394/2 (reversed) CCACCGGA.CGAGTGATTTTCGTGCTTGCTACCACGGATCCTCAGC.TGTCTTGCCTACC  133
SRR29245461.18287036/2            CCGCCGGA.CGAGTGATTTTTGTGCTTGCTACCACCGATCCTCAGC.TGTCTTGCCTACC  127
SRR29245461.18287036/1 (reversed) CCGCCGGA.CGAGTGATTTTTGTGCTTGCTACCACCGATCCTCAGC.TGTCTTGCCTACC  123
SRR29245461.1293495/1             CCGCCAGA.CGAGTGATTTTTGTGCTTGCTACCACCGATCCTCAGC.TGTCTTAAGATCG  123

Consensus                         DHMRDBY-MCMSKTST-SAACKCYWKKMWY                                265
SRR29245461.4108425/1             ------------------------------                                151
SRR29245461.15203625/2 (reversed) ------------------------------                                151
SRR29245461.18679978/2 (reversed) ------------------------------                                151
SRR29245461.16971908/2            ------------------------------                                151
SRR29245461.16972091/2            ------------------------------                                151
SRR29245461.13542963/2            ------------------------------                                151
SRR29245461.13543144/2            ------------------------------                                151
SRR29245461.14335201/2 (reversed) ------------------------------                                151
SRR29245461.33843948/1 (reversed) ------------------------------                                151
SRR29245461.10481394/1            ------------------------------                                151
SRR29245461.17458930/2 (reversed) ------------------------------                                151
SRR29245461.11609499/1            ------------------------------                                151
SRR29245461.14335201/1            ------------------------------                                151
SRR29245461.27756961/1 (reversed) ------------------------------                                151
SRR29245461.23582667/1 (reversed) ------------------------------                                151
SRR29245461.4828155/1 (reversed)  ------------------------------                                151
SRR29245461.13687947/1            ------------------------------                                151
SRR29245461.19813196/2 (reversed) ------------------------------                                151
SRR29245461.13710557/1 (reversed) ------------------------------                                151
SRR29245461.19813196/1            ------------------------------                                151
SRR29245461.13710557/2            ------------------------------                                151
SRR29245461.20895415/2 (reversed) ------------------------------                                151
SRR29245461.7037465/2             ------------------------------                                151
SRR29245461.23582667/2            ------------------------------                                151
SRR29245461.1293495/2 (reversed)  ------------------------------                                151
SRR29245461.17458930/1            ------------------------------                                151
SRR29245461.23590117/1 (reversed) ------------------------------                                151
SRR29245461.23303928/2            ------------------------------                                151
SRR29245461.9142730/2             ------------------------------                                151
SRR29245461.7037465/1 (reversed)  ------------------------------                                151
SRR29245461.5609983/1             ------------------------------                                151
SRR29245461.23501708/1 (reversed) ATCAT-------------------------                                151
SRR29245461.20895415/1            TCCAGTC-A---------------------                                151
SRR29245461.5048417/1 (reversed)  ATCATCT-C.CGT.G---------------                                151
SRR29245461.23303928/1 (reversed) ATCATCT-C.CGT.G.-C------------                                151
SRR29245461.10481394/2 (reversed) ATCATCT-C.CGT.G.-C..----------                                151
SRR29245461.18287036/2            ATCATCT-C.CGT.G.-C...G.TTT----                                151
SRR29245461.18287036/1 (reversed) ATCATCT-C.CGT.G.-C...G.TTTGATT                                151
SRR29245461.1293495/1             GAAGAGC-A.ACG.C.-G...T.CAGTCAC                                151

